PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002260.1_g000004.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

MYB

Protein Properties

Length: 405aa MW: 45852.8 Da PI: 7.0073

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002260.1_g000004.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.7	1.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+eEde+l ++++++G g+W++ ++ g+ R++k+c++rw +yl Rmu_sc0002260.1_g000004.1 14 RGRWTAEEDEILTNYIQLHGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 8*****************************99**********97 PP
2	Myb_DNA-binding	57.5	3.1e-18	108	153	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE+e +v++++ lG++ W++Ia++++ gRt++++k++w+++l Rmu_sc0002260.1_g000004.1 108 RGNITQEEEETIVKLHTALGNR-WSLIAAHLP-GRTDNEIKNYWNSHL 153 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MGRAPCCEKV GLKRGRWTAE EDEILTNYIQ LHGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRTDLRRGNI TQEEEETIVK LHTALGNRYV IMHAPHHLLY ILRTDLRRGN ITQEEEETIV 120 KLHTALGNRW SLIAAHLPGR TDNEIKNYWN SHLSRKIYTF TKLMKNECLI PTMINNVSKL 180 AAAKSKRRVR TSRSAMKSKN KLNKNGTVLA PFPQVPNPAY KSDVFESLTR ENPNQVQTSH 240 SMGLECWAPK ERDEKEEEEK TIRTLGGMQG SCLDITAGMI SSTTPVIYAA NNGEKEALDP 300 YECVDSDVIV DHNPSGSTNV VRENGVMGFT DDHEVTIKSH QGIWSSNIEG SCGEMYAFSS 360 PLNAAFDDHE WLDCDWFGGG GGGLQCHNDE LELWGEREVR IPWLR

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MGRAPCCEKV GLKRGRWTAE EDEILTNYIQ LHGEGSWRSL PKNAGLLRCG KSCRLRWINY  60
LRTDLRRGNI TQEEEETIVK LHTALGNRYV IMHAPHHLLY ILRTDLRRGN ITQEEEETIV  120
KLHTALGNRW SLIAAHLPGR TDNEIKNYWN SHLSRKIYTF TKLMKNECLI PTMINNVSKL  180
AAAKSKRRVR TSRSAMKSKN KLNKNGTVLA PFPQVPNPAY KSDVFESLTR ENPNQVQTSH  240
SMGLECWAPK ERDEKEEEEK TIRTLGGMQG SCLDITAGMI SSTTPVIYAA NNGEKEALDP  300
YECVDSDVIV DHNPSGSTNV VRENGVMGFT DDHEVTIKSH QGIWSSNIEG SCGEMYAFSS  360
PLNAAFDDHE WLDCDWFGGG GGGLQCHNDE LELWGEREVR IPWLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	1e-69	MYB family protein