PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002260.1_g000027.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GATA
Protein Properties Length: 156aa    MW: 16521.7 Da    PI: 10.1482
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002260.1_g000027.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.21.1e-183771135
                       GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                               C  Cgt+kTplWR gp g+k+LCnaCG++ rkk++
  Rmu_sc0002260.1_g000027.1 37 CFDCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRR 71
                               99******************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MLDPCDKLSD QGSESEDMNI IKHPNEGSSE EGQKRTCFDC GTSKTPLWRG GPAGPKSLCN  60
ACGIRSRKKR RAILGINKSG AGGGGGGGSG SADENRKGKK SSSNKQLGDG LKQRLLALGR  120
EVLMQRSTVE RQRRKLGEEE QAAVLLMALS YGSVSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.17e-50GATA family protein