PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002263.1_g000057.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 193aa    MW: 21413.1 Da    PI: 10.2185
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002263.1_g000057.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox53.15.4e-173090256
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                               ++R+ +t +q+++L+el+     + p+ e+ ++++ +l    +++ ++V++WFqN+Ra+ek
  Rmu_sc0002263.1_g000057.1 30 STRWLPTIDQIRILKELYDDkgVKSPTVEQVQRITLQLkwygQIENKNVFYWFQNQRAREK 90
                               58*****************6579*************************************9 PP
2Wus_type_Homeobox96.81.7e-312993265
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               ++tRW Pt +Qi+iL+ely+ +G+++P+ e++qrit +L+ yG+ie+kNVfyWFQN++aRe+ k+
  Rmu_sc0002263.1_g000057.1 29 SSTRWLPTIDQIRILKELYDdKGVKSPTVEQVQRITLQLKWYGQIENKNVFYWFQNQRAREKLKK 93
                               789****************999****************************************885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MEPQNRHPTE NGGSNKAAKS SPNMHCKQSS TRWLPTIDQI RILKELYDDK GVKSPTVEQV  60
QRITLQLKWY GQIENKNVFY WFQNQRAREK LKKKKLTSDV QVPKQRSGLV GGSINLNFGS  120
TSSAGVGGSI MEQRGEDHQE IKTFPLFPLH GEDIFGNMKT TSDGGGGHGG GSYISLELSL  180
SCEGKAGKSF RSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.14e-28WOX family protein