PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002270.1_g000018.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 385aa    MW: 41830.4 Da    PI: 7.0851
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002270.1_g000018.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.60.000522452831255
                                HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                        HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                R +++ +++  L +l+ +      +K + a++L +A+ YI+ Lq
  Rmu_sc0002270.1_g000018.1 245 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 283
                                6677889999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MNRGHVLQSS PVQQMMAAGN PNWWNINSMR APTTNQPSSS PFLPAPHHPS FFIPQFQPTS  60
SSSSSLPFIP SWHDNNNQNQ NQELPESWSQ LLLGGLVGEN DKANGLRQLF HQGKKLEDWE  120
EQILSSQAHL NAPVNVDVKQ ENSPPGSFLY GHHGNGNNND DFQSAALCSL SQIMPTTTAA  180
SASSPKSSCV TSFGSNMLDF SNKSEGRHPP PSRSSSECNS SATGGAVKKA RVQPSSSAQP  240
TFKVRKEKLG DRITALHQLV SPFGKTDTAS VLLEAIGYIR FLQNQIEALS LPYLGSGSPN  300
MRQQQQQSAV HGERNCMFPE DPGQLLNDNC MKRKGVNSEQ DAYEEPKKDL RSRGLCLVPV  360
SCTLQVGSDN GADYWAPAAL GGGFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.13e-81bHLH family protein