PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002275.1_g000007.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 232aa MW: 26325.7 Da PI: 4.6116

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002275.1_g000007.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	112.2	7e-35	80	163	3	97
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnss 86 ++kdrhski+T++g+RdRR Rlsa++a++f+d+qd+LGfd++sk+i+WL+ +ak+ai +l ++s++++ + ++ Rmu_sc0002275.1_g000007.1 80 ARKDRHSKIYTSKGPRDRRFRLSAQTAIEFYDVQDRLGFDRPSKAIDWLIHKAKAAIEALEDSSTTHQPQH---HQ-------- 152 79*************************************************************77766222...11........ PP TCP 87 sgkaaksaaks 97 g+a++++ k+ Rmu_sc0002275.1_g000007.1 153 GGNAEPETVKT 163 11111111111 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MTSHSQESLY LQMSQQRESK EEEEEEEEEE ENEAQDQPEV AQAQQDYGAS RVESKQPSMN 60 NERYGRIVKV QGGHVIRSIA RKDRHSKIYT SKGPRDRRFR LSAQTAIEFY DVQDRLGFDR 120 PSKAIDWLIH KAKAAIEALE DSSTTHQPQH HQGGNAEPET VKTHQPLDEG TMKNESKEPV 180 LDYAEEALNC APNLSEANFM EMGWFQSLMA WNYNAGDGGE GCSFNSSSVT LL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31070.1	1e-39	TCP family protein