PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002285.1_g000036.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

NAC

Protein Properties

Length: 192aa MW: 21520.4 Da PI: 10.0998

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002285.1_g000036.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	61.7	2.4e-19	14	94	1	78
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevd...iykvePwdLpkkvkaeekewyfFskrdkkyatgk.rknrat 78 lp+GfrF Ptdeelv++yL +k+ ++ ++++++i+e+d y+ +P++L +++ +e+ew+fF+++d ++ +++ +++r++ Rmu_sc0002285.1_g000036.1 14 LPVGFRFMPTDEELVTHYLMNKACSRAVPVADAIQEIDatrFYSNHPKNLV-TFSDGEREWFFFIHEDDESCSSHaQRKRTV 94 79***********************999998988874447889*6.7788999***999887765441333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
MGSQKGVVVS SDLLPVGFRF MPTDEELVTH YLMNKACSRA VPVADAIQEI DATRFYSNHP 60 KNLVTFSDGE REWFFFIHED DESCSSHAQR KRTVREVGNG IKEFRLTRPE PGIMTRLFRR 120 APATSGDKTF QTGSPPPSGR PSGVLLRRIS VSVAVQGGAD WRNRTRPENT VPTSARLRFF 180 LVELRTASPI DP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	2e-12	NAC family protein