PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002308.1_g000010.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 523aa    MW: 62086.2 Da    PI: 4.0069
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002308.1_g000010.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM76.65.8e-2461461128
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk.....kvka....eekewyfFskrdkkyatgkr 73 
                                l pG rF P ++el+ +yLk+kv+gk+++ +e  i e+d+y   ePw++ +     +  +    ++k++yfF++++k +a+ +r
  Rmu_sc0002308.1_g000010.1   6 LLPGHRFCPMEDELLLYYLKPKVNGKEVPGKESlICELDLYGDqEPWKIWErfearR--TndlrKNKDLYFFTQKKKVSAKASR 87 
                                579************************9887777******97549****74344442..1345466689*************** PP

                        NAM  74 knratksgyWkatgkdkevlskkgel......vglkktLvfykgrapkgektdWvmheyrl 128
                                 +r++ sg+Wk +   k+++  ++++      vg kkt ++ ++r+ +  + +W+m e++l
  Rmu_sc0002308.1_g000010.1  88 ISRKVGSGTWKGQVAAKNIYLLDENQkptttlVGFKKTYTYQNKRSVH--HGRWIMYEFEL 146
                                ********************984444456666********99655555..9********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 523 aa     Download sequence    
MEDHMLLPGH RFCPMEDELL LYYLKPKVNG KEVPGKESLI CELDLYGDQE PWKIWERFEA  60
RRTNDLRKNK DLYFFTQKKK VSAKASRISR KVGSGTWKGQ VAAKNIYLLD ENQKPTTTLV  120
GFKKTYTYQN KRSVHHGRWI MYEFELHKSQ LLPKKQVNKN DYVLCLLRKN DELPERKRKR  180
QQEEMLEEDY VEDGDGDNDL NCDPALLLEE PHEKRQCLLP CSDNNVAAPS LEWTELEQWF  240
NQQFLQPTPL EDEPAVSLQV YEDLGVQKPV TELQLRDENL GQQCHDIPTN TANEMMSGLD  300
FHHDENLEQQ MGDEVGVMAQ GEVYVYGGNL SDVIVGEDWA KSFMEDLMND EQLNTMEDWD  360
KSFMEDLMND EQLNTMEDWD KSFMEDLMND EQLNTMEDWD KSFMEDLMND EQLNTMEDWD  420
KSFMEDLMND EQLNTMEDWD KSFMEDLMND EQLNTMEDWD KSFMEDLMND EQLNTMEDWD  480
KSFMEDLMND EQLNTMEDWD KSFMEDLMND EQLNTMEVGN CIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.12e-18NAC family protein