PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002329.1_g000037.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 220aa    MW: 25343.8 Da    PI: 9.4053
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002329.1_g000037.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.95e-1656133176
                       FAR1   1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkw 76 
                                +fYn+YAk +GF+vr ++++ s + +g++t+ ++vCs +gkr+ee  + +++ +++++etr +C + +kv+  kd++ 
  Rmu_sc0002329.1_g000037.1  56 SFYNAYAKAMGFEVRSDYKRLSiRITGRVTSLRLVCSAQGKRREEYMSnKKRVHKPKKETRFNCPCLFKVRSVKDHHL 133
                                5******************999999*******************9988345556799*************99887665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MDGSYEPSIS DIGLVSQSSI NGSDCNEMKY KGVRYDNLST EDLKGQEFKT VEEAESFYNA  60
YAKAMGFEVR SDYKRLSIRI TGRVTSLRLV CSAQGKRREE YMSNKKRVHK PKKETRFNCP  120
CLFKVRSVKD HHLALAASMQ RVSIKPCHTY EYIVDRSGGF KNVRFIMKDL YNKLDSRRRE  180
ILLEGDAEAA LAYMRGKVAT DSHFYCKFSI DEDNRLANVH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-11FAR1 family protein