PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002351.1_g000061.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 193aa MW: 21709.3 Da PI: 8.9648

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002351.1_g000061.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	44.7	2.3e-14	30	90	2	56
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 +R+ +t++q+++L+el+ + p e+ ++++ +l +++ ++V++WFqN+ a+ek Rmu_sc0002351.1_g000061.1 30 NTRWLPTTDQIRILKELYDDkgVKSPIVEQVQRITLQLkwygQIENKNVFYWFQNQWAREK 90 58***************6579*********************************998 PP
2	Wus_type_Homeobox	91.4	8.3e-30	29	93	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRW Pt++Qi+iL+ely+ +G+++P e++qrit +L+ yG+ie+kNVfyWFQN+ aRe+ k+ Rmu_sc0002351.1_g000061.1 29 SNTRWLPTTDQIRILKELYDdKGVKSPIVEQVQRITLQLKWYGQIENKNVFYWFQNQWAREKLKK 93 789**************999**************************************885 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MEPQNRHPTE DGGSNKTTES SLNMHCKQSN TRWLPTTDQI RILKELYDDK GVKSPIVEQV 60 QRITLQLKWY GQIENKNVFY WFQNQWAREK LKKKNLTSDV QVPKQRSGLV GGSINLNFGS 120 TSSADVGGSI MEQRGEDHQE VKTLPLFPMH NEDIFGNMKT TSDGGGGHGG GSYISLELSL 180 SYEGKAGKSF WSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	1e-26	WOX family protein