PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002377.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 113aa    MW: 12571.4 Da    PI: 4.794
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002377.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM36.11.9e-114398149
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpk 49
                               lp+G++F+Ptd+el+ e+L++kve+k+      +   +    +i+   +i++++P++Lp 
  Rmu_sc0002377.1_g000001.1 43 LPAGVKFDPTDQELI-EHLEAKVEAKDtkshplI---DefipTIEGEdGICYTHPEKLPV 98
                               799************.99*******996665443...133333666646*********93 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
MNKSNIRSSD LIDAKLEEHQ MCGSKQCPGC GHKLEGKPDW LGLPAGVKFD PTDQELIEHL  60
EAKVEAKDTK SHPLIDEFIP TIEGEDGICY THPEKLPVLD ALTIIKLAEI LQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.13e-56NAC family protein