PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002406.1_g000009.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family G2-like
Protein Properties Length: 315aa    MW: 34202.1 Da    PI: 5.7713
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002406.1_g000009.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like95.34.8e-30160213155
                    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  Rmu_sc0002406.1_g000009.1 160 RPRLVWTPQLHKRFVDVVAHL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 213
                                59*******************.********************************8 PP
2Myb_DNA-binding48.42.2e-15162212148
                                TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                                r+ WT+++++++vd+v+ lG +   +ktI++ m+ +g+t++++ s++qky+
  Rmu_sc0002406.1_g000009.1 162 RLVWTPQLHKRFVDVVAHLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 212
                                789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MGEEVRMSEY EGGGSGGDGD EERVSEWEAG LPIADDLTPL SQPLIPMELA SAFSISPEPC  60
RTVVDVNRAS QKTVSTLRGG AHSQAYSSNY KSFEENNNRS DEPMVVELDE TEPYGGGGGR  120
EGSDSRKSRR VDSPEEADSA LRIENSSGGG DDPSGRAVKR PRLVWTPQLH KRFVDVVAHL  180
GIKNAVPKTI MQLMNVEGLT RENVASHLQK YRLYLKRMQG LSNEGPSSSD PLFASTPVPQ  240
SLHESGGSGP GHRQGHMPIS IPMPYPPGAM MAMPGYMGMS GGYHGFESHP SYNMMQQHKY  300
GSMVSYPPHV APNEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.23e-80G2-like family protein