PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002414.1_g000012.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 259aa MW: 28073.8 Da PI: 4.5408

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002414.1_g000012.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	47.3	3.6e-15	47	107	3	57
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+t+t+ ql++L+el++ ++p+ e+++ + +l +++ +++++WFqN +a+e++ Rmu_sc0002414.1_g000012.1 47 NRWTPTPAQLRILQELYYDraLKNPTPEQIQGICLHLkpygQIENKNIFFWFQNLKARERQ 107 7**************96579***********************************97 PP
2	Wus_type_Homeobox	90.5	1.6e-29	45	108	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RWtPtp Q++iL+ely+ ++l++P+ e+iq i +L+ yG+ie+kN+f+WFQN kaRerqk Rmu_sc0002414.1_g000012.1 45 TNNRWTPTPAQLRILQELYYdRALKNPTPEQIQGICLHLKPYGQIENKNIFFWFQNLKARERQK 108 579*************9879***************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
MEPRTLQLME LQTQQQMELQ AQQQVEDGGN NQAAGSSANT PIRPTNNRWT PTPAQLRILQ 60 ELYYDRALKN PTPEQIQGIC LHLKPYGQIE NKNIFFWFQN LKARERQKLK EIRNVRVGGS 120 LDLKFGSTTS TDGGRSIDLN FGSTDSTGDD GSIDLTLGSC VGYGVDPYSS SPFNTNTRTT 180 SFGTTGGQSP MEQQGGDHQE VETLPLFPEH GEDILGNPKT TSEEGSAFGY YLGGSGGHNS 240 GSPVSLELSL NPSGAADLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	1e-23	WOX family protein