PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002434.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Protein Properties

Length: 202aa MW: 23058.2 Da PI: 8.6619

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002434.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.7	5.2e-19	111	196	5	94
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 ++s++ + + l+lp kfa+++ k +++ +l+ s ++W+v++ r r+++++GW eFv++n+Lk+gD ++F+l+++ Rmu_sc0002434.1_g000001.1 111 SLHSSYITGHYLYLPAKFANRYLVK--QPRHAILRVASKKTWSVNV--RYAAARTTFQTGWFEFVQDNDLKQGDACIFMLTDNI 190 45789999999*********544..55679**********..77778899*********************98873 PP EE..EE CS B3 89 efelvv 94 + + v Rmu_sc0002434.1_g000001.1 191 KVVFDV 196 333444 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MPSLPLPLSR ACRLDDGDDE DDEHEDEEDS DDESIEILDP FPPHLKRKEK SPLASKIHKR 60 MRPSSRTQKF PEGGPEVPRK MPGPVMASSG KYIALQRANG FKSANPDFRI SLHSSYITGH 120 YLYLPAKFAN RYLVKQPRHA ILRVASKKTW SVNVRYAAAR TTFQTGWFEF VQDNDLKQGD 180 ACIFMLTDNI KVVFDVVFFR AT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49480.1	1e-18	B3 family protein