PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002441.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 231aa    MW: 25043.9 Da    PI: 8.4883
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002441.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.44.7e-204795355
                        AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               ++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa+++l+g
  Rmu_sc0002441.1_g000004.1 47 FRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARSLRG 95
                               8*******.**********883....5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MRRAGRATAA AANNQSPASC KKPRAAAAAP KTTPSSSQQQ QQPQIRFRGV RKRPWGRFAA  60
EIRDPWKKTR VWLGTFDSAE DAARAYDAAA RSLRGPKAKT NFSLPCDPFY GGDFNDDAIC  120
SKIDVIQASR PTSSSLSSTV ESFSGPRVNS GKPPPMKPTQ RRPVYPVSPE DCHSDCDSSS  180
SVVDDGDDCV LTSSFRKALP FDLNMPPPMD GFDFSGDNVD DHDLQATALC L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.13e-23ERF family protein