PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002449.1_g000010.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

NAC

Protein Properties

Length: 160aa MW: 18900.5 Da PI: 9.8654

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002449.1_g000010.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	38.5	3.5e-12	13	93	42	128
NAM 42 vePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmh 124 + P+dL+ +k++yfF+++++ ++t++ +r++ +g+Wk + k+v+s +g++vglkk L++ + +a++ ++ W++ Rmu_sc0002449.1_g000010.1 13 CRPNDLR-----LNKDIYFFTQHKTMSSTDTLIRRTVVNGTWKGDDSGKPVKSLeTGRVVGLKKRLTYKN-QASE-HNGCWILY 89 7788886.....35799************************9999999988668999****984.3333.6999** PP NAM 125 eyrl 128 e+ l Rmu_sc0002449.1_g000010.1 90 EFYL 93 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence
MVLVEQWWWS SACRPNDLRL NKDIYFFTQH KTMSSTDTLI RRTVVNGTWK GDDSGKPVKS 60 LETGRVVGLK KRLTYKNQAS EHNGCWILYE FYLDPSLRDK KQKVEDYVLC LLRKNGEPKA 120 KIKKRRKQRE EEDVLENNYA CDEGENTNKE QPQAKRQRMG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	123	127	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28530.1	1e-07	NAC family protein