PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002451.1_g000034.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 183aa    MW: 20206.4 Da    PI: 8.4663
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002451.1_g000034.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.81.6e-173390557
                               SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  5 ttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               +++t++q+++L+el+ k   yp+ e+ ++++ +l    +++ ++V++WFqN++ +e++
  Rmu_sc0002451.1_g000034.1 33 WAPTTDQIRILKELYDKgVTYPTPEQVQRITLQLkrygQIENKNVFYWFQNHKSRERQ 90
                               99**************99**************************************97 PP
2Wus_type_Homeobox103.11.9e-333092365
          Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               +t W+Pt++Qi+iL+ely++G+  P+ e++qrit +L++yG+ie+kNVfyWFQN+k+Rerqk+
  Rmu_sc0002451.1_g000034.1 30 STWWAPTTDQIRILKELYDKGVTYPTPEQVQRITLQLKRYGQIENKNVFYWFQNHKSRERQKK 92
                               678**********************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MEPQTQQPTE DGGSNKAAGS SANMHCKRSS TWWAPTTDQI RILKELYDKG VTYPTPEQVQ  60
RITLQLKRYG QIENKNVFYW FQNHKSRERQ KKKLTSDVHV PMRTNSTDAG GSISLNFGST  120
SSTGVGGSIN LNFGSTSATG VGGSIHVNFG STSSTFMEQR GEDHQEIETL PLFPMHGETY  180
VAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.17e-27WOX family protein