PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002532.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C3H
Protein Properties Length: 135aa    MW: 15255.5 Da    PI: 7.3852
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002532.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH30.56.4e-101437225
                               -S---SGGGGTS--TTTTT-SS-S CS
                    zf-CCCH  2 ktelCrffartGtCkyGdrCkFaH 25
                               ++++C+f+++ G C++GdrC++ H
  Rmu_sc0002532.1_g000007.1 14 DRVNCPFYFKIGACRHGDRCSRLH 37
                               6899******************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MAEHLASIFG TEKDRVNCPF YFKIGACRHG DRCSRLHTKP SISPTLLLSN MYQRPDMLTN  60
PGVDPQGQAL DPRKIQDNFE VPQFSPLYLF DFNPNFFNLF FTLTDFKCFP LGPSVLNAQF  120
AGQFSLRSSV LGVEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44785.16e-33C3H family protein