PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002532.1_g000008.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C3H
Protein Properties Length: 193aa    MW: 22879.8 Da    PI: 11.5876
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002532.1_g000008.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.39.9e-072043226
                               -S---SGGGGTS--TTTTT-SS-SS CS
                    zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                               +++ Cr + +   C++G+ C+F+H 
  Rmu_sc0002532.1_g000008.1 20 REATCRQYEE-NVCNRGGYCNFMHL 43
                               6789**9999.*************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MLNILGRPII VDFSPVTDFR EATCRQYEEN VCNRGGYCNF MHLKKISREL RRRLFGRNRR  60
RRSRSRSRSH SPQKHQRGGY QERPHGGRGF GRRGGDDERD RFNDKNRRPR SRSPGGRRGR  120
SRSPVGRRNR SPPARESSAE RRAKIEQWNR EKEQVDSGDK HDNNNNNSNN NDDEWNGDNN  180
SDQYYDPQQQ QQQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15764RNRRRRSR
26068RRRSRSRSR