PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002549.1_g000009.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family G2-like
Protein Properties Length: 337aa    MW: 37658.3 Da    PI: 7.9068
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002549.1_g000009.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.72.7e-332074155
                    G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                               kprl+WtpeLH+rFveav+qLGG++kAtPkt++++m+++gLtl+h+kSHLQkYRl
  Rmu_sc0002549.1_g000009.1 20 KPRLKWTPELHQRFVEAVNQLGGADKATPKTLMRVMGIHGLTLYHLKSHLQKYRL 74
                               79****************************************************8 PP
2Myb_DNA-binding63.44.5e-202273148
                               TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                               r++WT+e+++++v+av+qlGg    t+kt +r mg  g+tl+++ks++qky+
  Rmu_sc0002549.1_g000009.1 22 RLKWTPELHQRFVEAVNQLGGAdkaTPKTLMRVMGiHGLTLYHLKSHLQKYR 73
                               89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MGLQNMQNQN MNLVLSTDAK PRLKWTPELH QRFVEAVNQL GGADKATPKT LMRVMGIHGL  60
TLYHLKSHLQ KYRLGKSQQS ENCSDSLQED YKEIQSSDGH FCTDINDETH SRINESAQIA  120
QSLRLQMEVQ RKLHEQIEVQ RHLQLRIEAQ GKYLQSVLKK AQETLSGYNS SSVGVELAKA  180
EISQLVSMVN NGCPSSSFSE LTETGTPTLK DIERKQIRGT ICSMESSLTS SESSGRKEEK  240
FNTTCVELPL MEIHPEVKSL NNVTSNDQNH GIGRKRSISS SISDGMCVEQ PVAKRSSATH  300
RDKSGNHLRF VTIDLNSKYQ NDIDSGSKVL DLNSKGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.19e-87G2-like family protein