PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002555.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 154aa    MW: 16947 Da    PI: 9.9927
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002555.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.97.5e-052244123
                               EEETTTTEEESSHHHHHHHHHHT CS
                    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                               ykC +C k+F++   L  H++ H
  Rmu_sc0002555.1_g000003.1 22 YKCRHCEKTFRNGQALGGHQNAH 44
                               9***************9999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MAPSSEANSV NSTATSGPGE VYKCRHCEKT FRNGQALGGH QNAHRGVHRG VMRRIANAMG  60
SLRSPQQLAA GPSSFESGEV NQVVHLRRTT EPEKPPEGKT RIFLEEWRDK AAAESDSERT  120
VSQSIVPKRP CYKRKGEEVM STPHNINLDL KLGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25160.12e-08C2H2 family protein