PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002557.1_g000012.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 192aa    MW: 21051.5 Da    PI: 8.4584
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002557.1_g000012.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.93.4e-183090257
                               T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               ++R+++t++q+++L+e + k  + p+ e+ + ++ +l    +++ ++V++WFqN++a+ek+
  Rmu_sc0002557.1_g000012.1 30 STRWAPTTDQIRILKEIYDKgVKSPTVEQVQMITLQLkwygEVESKNVFYWFQNHKAREKR 90
                               68*****************99***************************************7 PP
2Wus_type_Homeobox1041e-332991264
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                               ++tRW+Pt++Qi+iL+e+y++G+++P+ e++q it +L+ yG++e+kNVfyWFQN+kaRe++k
  Rmu_sc0002557.1_g000012.1 29 NSTRWAPTTDQIRILKEIYDKGVKSPTVEQVQMITLQLKWYGEVESKNVFYWFQNHKAREKRK 91
                               589**********************************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MEPQAQQPME NGGSNKAVGS SANMHCRRNS TRWAPTTDQI RILKEIYDKG VKSPTVEQVQ  60
MITLQLKWYG EVESKNVFYW FQNHKAREKR KIPPKATGKT PGLVDGSINL NFGSTSSTGV  120
DGSIDLNFGS ASSTFMEQRG EDHQDIKTLP LFPMHGENIF GNMKTTFEGG SGYSGGSLSL  180
ELSLNSRAAD SA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-26WOX family protein