PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002574.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 230aa    MW: 25421.9 Da    PI: 6.3685
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002574.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.61.4e-082773148
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                               r  W   Ede+l  av ++G+++W +I++ +   +++kq k r +++l
  Rmu_sc0002574.1_g000003.1 27 RRVWKNTEDEILMAAVMRYGKNQWVRISSLVV-SKSAKQWKARCYQWL 73
                               568*****************************.******999999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MTYWEFPGGK VKMRIMMKRF PTHDKGRRVW KNTEDEILMA AVMRYGKNQW VRISSLVVSK  60
SAKQWKARCY QWLDPSIKKT EWTREEDEKL LHLAMLMIAH LLREAATATA TATATAPATT  120
TPPLDTALAP ATITATTPPP PDTATTTALA PATTSSHDTT TAHATSAVDS WLEDGEMARS  180
PSRVSGSVET QSGLRSDVGR LAILGLELEF FGEGVEIGEM ERLDKVSEWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09770.11e-29MYB family protein