PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002592.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 99aa    MW: 11238.7 Da    PI: 10.1919
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002592.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.91.3e-091356344
                               SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
            Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                               +WT+   +++ +a + + ++   +W+ +a+ +g g++++++k ++
  Rmu_sc0002592.1_g000001.1 13 SWTPKQNKRFEKALAVYDKDtqdRWHNVAKAVG-GKSAEEVKRHY 56
                               7********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
MASLSSSRNS NSSWTPKQNK RFEKALAVYD KDTQDRWHNV AKAVGGKSAE EVKRHYEILV  60
QDLMHIESGQ VAIPNYRATG SSTRGIADYE QRLMKNLKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.27e-43MYB_related family protein