PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002646.1_g000006.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 154aa    MW: 17289 Da    PI: 7.7234
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002646.1_g000006.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP58.82.3e-18751312079
                        TCP  20 RRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesss 79 
                                  vRl a+ a +f+d+q +LGfd++sk+i+WL+ +ak++i +l ++s++++ +    +++
  Rmu_sc0002646.1_g000006.1  75 HEVRLLAQSATEFYDVQYRLGFDRPSKAIDWLIHKAKASIEALEDSSTTHQPQH---HQE 131
                                579*******************************************77777222...222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MGGEWVVQIV LFGPSLVNLV FTREALRLDA KESQRPVYPF AAIVGQDEMK LCLLLNVIDP  60
KIGGVMRIVK VQGGHEVRLL AQSATEFYDV QYRLGFDRPS KAIDWLIHKA KASIEALEDS  120
STTHQPQHHQ EGNAEPETIK TYQPLPKALK MRAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.21e-16TCP family protein