PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002676.1_g000006.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 601aa MW: 69244.7 Da PI: 8.8435

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002676.1_g000006.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.4	1.1e-11	62	97	3	38
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 ++k++rr+++NReAAr+sR RKka++++Le+ +L Rmu_sc0002676.1_g000006.1 62 ADKVQRRLEQNREAARKSRMRKKAYVQQLETSRLKL 97 79****************************854444 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MGIYEPFRQV GVWRETFSGG YGSNIGASTI VEVDSGLENK IGFGSHESMG PSGNDQESNR 60 SADKVQRRLE QNREAARKSR MRKKAYVQQL ETSRLKLAQL ELELDRTRKQ VAYGGSSFGG 120 GHMGYNGIVN SGITTFELEY GHWVEEQHRQ NNELRKALQE HATEIELRLL VEGGLNHYAT 180 LFRMKADAAK ADIFYLLSGI WRTSVERYFH WIGGFRPSEL LNIIEPQLEP LTDPQPLDFY 240 NLRQSSQQAE DALSQGMDKL QQTLAKTLEA DQIWSGETYG SQMAAAFEKF EALESFVSQA 300 DHLRQQTLQQ MSRILTTHQA ARGLLALGEY FERLRALSSL WAARPREPAA HQARFSFRVS 360 FQRNPNYSPP SLSPASSDFA RLNRSESWFR ANQRRSIVRA SNWTHPKSPY ETLELELDAD 420 DEQIKVAYRR LAKFYHPDVY DGRGTLEEGE TAEARFIKIQ AAYELLLDEE KRGQYDRDNR 480 VNPLKASEAW MEWLMKKRKA FDQRGDMAIA AWAEQQQREM NIRARRLSRS KVDPDEEKRI 540 LAREKKASAE YFSSTLKRHT LVLKKRDLMR RKAEEDKRKI IGQLLAAEGL ELDTDDEETR 600 K

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MGIYEPFRQV GVWRETFSGG YGSNIGASTI VEVDSGLENK IGFGSHESMG PSGNDQESNR  60
SADKVQRRLE QNREAARKSR MRKKAYVQQL ETSRLKLAQL ELELDRTRKQ VAYGGSSFGG  120
GHMGYNGIVN SGITTFELEY GHWVEEQHRQ NNELRKALQE HATEIELRLL VEGGLNHYAT  180
LFRMKADAAK ADIFYLLSGI WRTSVERYFH WIGGFRPSEL LNIIEPQLEP LTDPQPLDFY  240
NLRQSSQQAE DALSQGMDKL QQTLAKTLEA DQIWSGETYG SQMAAAFEKF EALESFVSQA  300
DHLRQQTLQQ MSRILTTHQA ARGLLALGEY FERLRALSSL WAARPREPAA HQARFSFRVS  360
FQRNPNYSPP SLSPASSDFA RLNRSESWFR ANQRRSIVRA SNWTHPKSPY ETLELELDAD  420
DEQIKVAYRR LAKFYHPDVY DGRGTLEEGE TAEARFIKIQ AAYELLLDEE KRGQYDRDNR  480
VNPLKASEAW MEWLMKKRKA FDQRGDMAIA AWAEQQQREM NIRARRLSRS KVDPDEEKRI  540
LAREKKASAE YFSSTLKRHT LVLKKRDLMR RKAEEDKRKI IGQLLAAEGL ELDTDDEETR  600
K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77920.1	1e-142	bZIP family protein