PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002687.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 131aa    MW: 15010.2 Da    PI: 8.6861
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002687.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.26.1e-0581101323
                                ETTTTEEESSHHHHHHHHHHT CS
                    zf-C2H2   3 CpdCgksFsrksnLkrHirtH 23 
                                C +C+k  ++ s +++H++tH
  Rmu_sc0002687.1_g000004.1  81 CLHCPKITKSTSAMESHQQTH 101
                                9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 131 aa     Download sequence    
MEKWEQISVN HVRCLRCNDK FLAVRSVMEK HERQHDEGSN FGEEEEGDDK GVEKNVQAPL  60
DGKGVEKKVQ APLVKPAQIA CLHCPKITKS TSAMESHQQT HYIKFYRACG KCKNKIVTKA  120
EYNLHKKKCD I