PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002701.1_g000052.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 208aa    MW: 22301.9 Da    PI: 4.4221
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002701.1_g000052.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H222.62.7e-074667223
                               EETTTTEEESSHHHHHHHHHHT CS
                    zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                               +C+ Cg sF+ ++nLk H+++H
  Rmu_sc0002701.1_g000052.1 46 TCEECGSSFKKPENLKLHMQSH 67
                               6*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MNTMHYMVVN TTGATDKLNE VDIESGEDEM EMAKASEEVV VENSNTCEEC GSSFKKPENL  60
KLHMQSHSLE VGDIEGDAPS AKRLRMSCSD ALQDMISSEE LSLYGSAQNN AESAQDSLVN  120
VGPLKDFSYG LRINADANAT GIAKQSNYEL VCGSGHGKNG SLCVLRQSIP PEMITEKYDA  180
DPAAKAAAAT VLGIQVGCGF RSNIPCRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72050.25e-08C2H2 family protein