PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002709.1_g000040.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 123aa MW: 14417.5 Da PI: 9.6334

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002709.1_g000040.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	52.9	6.2e-17	47	107	3	57
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+t+t+ ql++L+el++ ++p+ e+++++ +l ++++++V++WFqN +a+e++ Rmu_sc0002709.1_g000040.1 47 NRWTPTPAQLRILQELYYDkvLKNPTPEQIQKICLHLqqygQIEDKNVFFWFQNLKARERQ 107 7**************96679***********************************97 PP
2	Wus_type_Homeobox	99.9	1.8e-32	45	108	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RWtPtp Q++iL+ely+ + l++P+ e+iq+i +L++yG+iedkNVf+WFQN kaRerqk Rmu_sc0002709.1_g000040.1 45 TTNRWTPTPAQLRILQELYYdKVLKNPTPEQIQKICLHLQQYGQIEDKNVFFWFQNLKARERQK 108 679*************987899*************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 123 aa Download sequence
MEPRTLQLME LQTQQQMELQ AQQPTEEGGS NQAAGSSANT PIRPTTNRWT PTPAQLRILQ 60 ELYYDKVLKN PTPEQIQKIC LHLQQYGQIE DKNVFFWFQN LKARERQKLK EIRNVRPQPI 120 RGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	1e-25	WOX family protein