PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002711.1_g000012.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

VOZ

Protein Properties

Length: 672aa MW: 75093.8 Da PI: 7.1264

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002711.1_g000012.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	443.8	2.1e-136	396	612	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaa 84 pppsaflgpkcalwdc+rpaqg +w+qdycssfha+lalneg+pg++pvlrp+gi+lkdgllfaalsak+qgk+vgipecegaa Rmu_sc0002711.1_g000012.1 396 PPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDGLLFAALSAKAQGKDVGIPECEGAA 479 89******************************************************************************** PP VOZ 85 takspwnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewh 168 takspwna+elfdl +lege +rewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+efgglkrsyymdpqp+++fewh Rmu_sc0002711.1_g000012.1 480 TAKSPWNAPELFDLLVLEGEMLREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWH 563 ******************************************************************************** PP VOZ 169 lyeyeineldalalyrlelklvdekksakgkvskdsladlqkklgrlta 217 lyeyein++da+alyrlelklvd+kk++kgk+s+ds+adlqk++grl+a Rmu_sc0002711.1_g000012.1 564 LYEYEINKCDACALYRLELKLVDGKKNSKGKLSNDSVADLQKQMGRLSA 612 *********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 672 aa Download sequence
MVLPLVKLGT LLLKTMSKPV AARLKQAAGK HPRFRQIIVN MAQANHQITT KMQRRLYSHA 60 TDVEIRPLNE EKAVQAAVDL IGELFVFTVA GVALIFEVQR SARSEARKEE ARKQELETMK 120 QRDEELSREV ELLRSKYEEL EKLAKGQGLG GIFNFKRVAD TEGANQQRKA SQKTSQSLLL 180 HHQHSTKPET HFSFWALWNL ESNTLRKRGL RSDEGAGGMF MDLQFARKES RTIDATLLEE 240 QVHQMLREWK SELNEPSPAS SLQQGGSVGS FSSDICRLLQ LCEEEDDASS PLAAPKPEPN 300 DHKLEVGESL VFQEGFSVNH RQQEHGFPLA DQGKSSLLGV RSAGVNNLEG ANQLDYQQFD 360 LHQDFDHNYY SCFNGTALSA GDALSHVTSY LPSICPPPSA FLGPKCALWD CPRPAQGLDW 420 CQDYCSSFHA ALALNEGPPG MAPVLRPGGI GLKDGLLFAA LSAKAQGKDV GIPECEGAAT 480 AKSPWNAPEL FDLLVLEGEM LREWLFFDKP RRAFESGNRK QRSLPDYNGR GWHESRKQVM 540 NEFGGLKRSY YMDPQPLNHF EWHLYEYEIN KCDACALYRL ELKLVDGKKN SKGKLSNDSV 600 ADLQKQMGRL SAEFPSDNKR NVKGRAKVNA KVGVGTVYYT PTRGTATNGT FDYGTGPPYD 660 YLVDNLSGYY LT

Sequence ? help Back to Top

Protein Sequence Length: 672 aa Download sequence

MVLPLVKLGT LLLKTMSKPV AARLKQAAGK HPRFRQIIVN MAQANHQITT KMQRRLYSHA  60
TDVEIRPLNE EKAVQAAVDL IGELFVFTVA GVALIFEVQR SARSEARKEE ARKQELETMK  120
QRDEELSREV ELLRSKYEEL EKLAKGQGLG GIFNFKRVAD TEGANQQRKA SQKTSQSLLL  180
HHQHSTKPET HFSFWALWNL ESNTLRKRGL RSDEGAGGMF MDLQFARKES RTIDATLLEE  240
QVHQMLREWK SELNEPSPAS SLQQGGSVGS FSSDICRLLQ LCEEEDDASS PLAAPKPEPN  300
DHKLEVGESL VFQEGFSVNH RQQEHGFPLA DQGKSSLLGV RSAGVNNLEG ANQLDYQQFD  360
LHQDFDHNYY SCFNGTALSA GDALSHVTSY LPSICPPPSA FLGPKCALWD CPRPAQGLDW  420
CQDYCSSFHA ALALNEGPPG MAPVLRPGGI GLKDGLLFAA LSAKAQGKDV GIPECEGAAT  480
AKSPWNAPEL FDLLVLEGEM LREWLFFDKP RRAFESGNRK QRSLPDYNGR GWHESRKQVM  540
NEFGGLKRSY YMDPQPLNHF EWHLYEYEIN KCDACALYRL ELKLVDGKKN SKGKLSNDSV  600
ADLQKQMGRL SAEFPSDNKR NVKGRAKVNA KVGVGTVYYT PTRGTATNGT FDYGTGPPYD  660
YLVDNLSGYY LT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	VOZ family protein