PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002717.1_g000004.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 207aa MW: 23804.9 Da PI: 7.9327

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002717.1_g000004.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.1	2.2e-16	44	127	5	90
FAR1 5 eYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +Y + +GF vr+ +s++s+r++e+++++f C+++g++ +e + +e+r + r +Cka++ v + ++g ++v+ +++ H+H+ Rmu_sc0002717.1_g000004.1 44 FYPQVTGFIVRIGSSRRSRRTNEFIRKEFLCNRQGNSPSELTG--DEKRICGVVREDCKARMIVGRVNSGGFVVNIFDECHTHP 125 68899****************************99998877..8999999*****************************9 PP FAR1 89 la 90 ++ Rmu_sc0002717.1_g000004.1 126 MT 127 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MEDNNEMVVP TEMETNGMVV HAEVETQHIQ VIPPSQENVS TSAFYPQVTG FIVRIGSSRR 60 SRRTNEFIRK EFLCNRQGNS PSELTGDEKR ICGVVREDCK ARMIVGRVNS GGFVVNIFDE 120 CHTHPMTSPK RSHLLKSNRR LTKAQRSLWQ QLSMVNIPTH QQFDILGVQA GGFQYIGCTQ 180 QDLYNLERDK RKETRGHDGE MLHDYFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-12	FAR1 family protein