PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002722.1_g000010.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 114aa    MW: 13034.5 Da    PI: 7.7132
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002722.1_g000010.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM232.2e-07727222
                        NAM  2 ppGfrFhPtdeelvveyLkkk 22
                               p+G+rFhPtd elv +yL+++
  Rmu_sc0002722.1_g000010.1  7 PVGYRFHPTDLELVAYYLHNR 27
                               89****************986 PP
2NAM34.18.2e-113810053115
                        NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapk 115
                                +ee+ +yfF++r+k ++++k+  r++ sg+W+a+ +++ v + +++++g+k+ + +  g++p+
  Rmu_sc0002722.1_g000010.1  38 KEEETLYFFTHRKKLNPKEKKFDRKVGSGTWSAQYSKTVVAADNSTVIGIKREFRYEGGSDPH 100
                                245577******************************99999999************9888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
MELGAYPVGY RFHPTDLELV AYYLHNRDMF CAQSNNMKEE ETLYFFTHRK KLNPKEKKFD  60
RKVGSGTWSA QYSKTVVAAD NSTVIGIKRE FRYEGGSDPH QNGADAGVPD HISQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.16e-12NAC family protein