PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002748.1_g000022.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TALE

Protein Properties

Length: 290aa MW: 32733.8 Da PI: 6.6793

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002748.1_g000022.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.7	8.4e-08	239	272	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + Rmu_sc0002748.1_g000022.1 239 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 272 469*****************************87 PP
2	ELK	25.5	3e-09	193	214	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ Rmu_sc0002748.1_g000022.1 193 ELKIELKQGFKSRIEDVREEIL 214 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence
MQDSGLGMMG SGGGGGLSGG GDDHTHQLKS EIATHPLYEQ LLSAHVSCLR VATPIDQLPL 60 IDAQLSQSHH LLRSYASHQQ QHGHSLSPHE RQELDNFLSQ YLIVLCSFKE QLQQHVRVHA 120 VEAVMACREI ESTLQALTGV SLGEGTGATM SDDEDDMPMD FSMDQAGSDA HDMMGFGLPT 180 ESERSLMERV RQELKIELKQ GFKSRIEDVR EEILRKRRAG KLPGDTTTVL KNWWQQHSKW 240 PYPTEDDKAK LVEETGLQLK QINNWFINQR KRNWHSNSQS VTSLKSKRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	270	290	RKRNWHSNSQSVTSLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-164	TALE family protein