PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002751.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 115aa    MW: 13361.2 Da    PI: 9.8897
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002751.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox52.86.7e-17867356
                               --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                               +R+ +t++q+++L+el+     + p+ e+ ++++ +l    +++ ++V++W+qN+Ra+ek
  Rmu_sc0002751.1_g000003.1  8 TRWLPTTDQIRILKELYDDkgVKSPTVEQVQRITLQLkwygQIENKNVFYWYQNQRAREK 67
                               7*****************6579*************************************9 PP
2Wus_type_Homeobox96.52.2e-31770365
          Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               +tRW Pt++Qi+iL+ely+ +G+++P+ e++qrit +L+ yG+ie+kNVfyW+QN++aRe+ k+
  Rmu_sc0002751.1_g000003.1  7 NTRWLPTTDQIRILKELYDdKGVKSPTVEQVQRITLQLKWYGQIENKNVFYWYQNQRAREKLKK 70
                               79****************999****************************************885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
MHCKQCNTRW LPTTDQIRIL KELYDDKGVK SPTVEQVQRI TLQLKWYGQI ENKNVFYWYQ  60
NQRAREKLKK KNLTSDVQVP KQRSGLVGGS INLNFGSTSY ADVGGSIMEQ RGEDH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.13e-28WOX family protein