PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002755.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 227aa    MW: 25372.8 Da    PI: 10.6025
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002755.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR132.82.2e-102989159
                       FAR1  1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetr 59
                               +fYn+Y k +GF+vr ++++ s +  g++t+ ++vCs +gkr+ee  + +++ r++++etr
  Rmu_sc0002755.1_g000002.1 29 SFYNAYEKAMGFDVRSDYKRLSiRIIGRVTSLRLVCSAQGKRREEYMSnKKRVRKPKKETR 89
                               5******************9998999******************99882333344555554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MQYKGVRYDK LSTEDLKGQE FKTVEEAESF YNAYEKAMGF DVRSDYKRLS IRIIGRVTSL  60
RLVCSAQGKR REEYMSNKKR VRKPKKETRF SLSVLALPRR RCDAAGRVLM VMVLLALRLA  120
IFRLASAGRG DGVFRGVSGG GLKVGIYRFD PSDQVWLFWC LLCGGGIAVV VIFLDAGGSP  180
SITVSRGGGI VVVCMWQVHR EVKAGLGMAR LVWALDIAFF WASWTVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.23e-07FAR1 family protein