PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002771.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 305aa    MW: 33334.9 Da    PI: 8.7525
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002771.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.71e-081541941055
                                HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                        HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                r+RR+ + +++  L++llP+      kK++ a++Le A +Y++ Lq
  Rmu_sc0002771.1_g000001.1 154 RKRRQTLSDKMRCLQKLLPWE-----KKMDNATTLEAAHRYVRFLQ 194
                                9*******************9.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MDKTEKESLT SLHQESSSKS PEETQATFTG MFPVNLHSIL AANTTQPLLP LSLFADNYCS  60
LSAPKTEPPL FHNRNLHQDQ PPQYGAVSAQ TSSLIDYYSI FNHLPDLLSL DHSPYKRPRL  120
LDHQTLASSY QLYPTPAESP PAPVVVPRGS SLARKRRQTL SDKMRCLQKL LPWEKKMDNA  180
TTLEAAHRYV RFLQAQVAAL QAMPIVASDS AGSLPVLTRG VGGGTGEVEV LSTLSRSQML  240
QVAVNSPVAQ MRMSDLGRCV FSVEQLALLN KKSVIRSAMV SASGHYYPTT TTSFIDSSAS  300
ASTTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.13e-24bHLH family protein