PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002784.1_g000010.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family EIL
Protein Properties Length: 215aa    MW: 24154.2 Da    PI: 9.3026
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002784.1_g000010.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3123.92.8e-38110449172
                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX- CS
                       EIN3  49 msraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersse 132
                                m+raQD+iLkYM+k+mevc+a+GfvYgi+p+kgk                     n+p aisky ++ l+ + + s   + +s+
  Rmu_sc0002784.1_g000010.1   1 MARAQDSILKYMVKIMEVCQARGFVYGIVPKKGKS--------------------NAPLAISKYLPEVLLEQAGTSGLDHDNSY 64 
                                89******************************996....................689******99999988877776679*** PP

                                ---STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH CS
                       EIN3 133 shslselqDTtlgSLLsalmqhcdppqrrfplekgvepPW 172
                                 h l++lqDTtlgSLLsalmqhc+ppqrrfplekg++pPW
  Rmu_sc0002784.1_g000010.1  65 VHLLHDLQDTTLGSLLSALMQHCKPPQRRFPLEKGLAPPW 104
                                ***************************************8 PP
2EIN390.15.1e-28105190197281
                                -GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.XXXXXXXXXXXXXX CS
                       EIN3 197 kphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.slrkqspkvtlsce 279
                                kphdlkkawkvs L+avikhm p+++++r+l+ qsk+lqdkm+ake++++++v+nqee++++ +  +++ s+ + +  + l+++
  Rmu_sc0002784.1_g000010.1 105 KPHDLKKAWKVSALAAVIKHMVPNLDRVRRLVKQSKCLQDKMTAKETAIWSKVVNQEEAILQLITDQKPiSCPEIAGTTALHSN 188
                                8*********************************************************97755554444444443334444444 PP

                                XX CS
                       EIN3 280 qk 281
                                +k
  Rmu_sc0002784.1_g000010.1 189 EK 190
                                33 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MARAQDSILK YMVKIMEVCQ ARGFVYGIVP KKGKSNAPLA ISKYLPEVLL EQAGTSGLDH  60
DNSYVHLLHD LQDTTLGSLL SALMQHCKPP QRRFPLEKGL APPWKPHDLK KAWKVSALAA  120
VIKHMVPNLD RVRRLVKQSK CLQDKMTAKE TAIWSKVVNQ EEAILQLITD QKPISCPEIA  180
GTTALHSNEK RKCMFDDDCS ELDRCSTCSS KNFKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.13e-75EIL family protein