PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002786.1_g000030.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 91aa MW: 10647.1 Da PI: 10.3425

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002786.1_g000030.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.6	8.9e-18	31	91	3	57
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+t+t++q+++L+el++ + p+ae+++++ +l +++ ++V++WFqN +a+e++ Rmu_sc0002786.1_g000030.1 31 TRWTPTTDQIRILKELYYDkgVKSPTAEQIQRICLQLkqygKIEGKNVFFWFQNLKARERQ 91 8**************96579***********************************97 PP
2	Wus_type_Homeobox	104.4	7.2e-34	29	91	2	63
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerq 63 + tRWtPt++Qi+iL+ely+ +G+++P++e+iqri +L++yGkie+kNVf+WFQN kaRerq Rmu_sc0002786.1_g000030.1 29 SDTRWTPTTDQIRILKELYYdKGVKSPTAEQIQRICLQLKQYGKIEGKNVFFWFQNLKARERQ 91 579*************9889**************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 91 aa Download sequence
MEPQIQQPTE DGGSNKAAGS SVNMLRRRSD TRWTPTTDQI RILKELYYDK GVKSPTAEQI 60 QRICLQLKQY GKIEGKNVFF WFQNLKARER Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	5e-31	WOX family protein