PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002792.1_g000029.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 197aa MW: 22034.6 Da PI: 9.4232

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002792.1_g000029.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.2	6.5e-14	31	94	3	56
--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHC......TS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFe....knrypsaeereeLAkkl......gLterqVkvWFqNrRakek 56 +R+ +t++q+++L+el+ k++++ + +r L + l +++ ++V++WFqN+Ra+ek Rmu_sc0002792.1_g000029.1 31 SRWLPTTDQIRILKELYDdkgvKSPTVEQVQRSTLQSTLqlkwyrQIENKNVFYWFQNQRAREK 94 7***************65444555555566667777799********************9 PP
2	Wus_type_Homeobox	79.2	5.5e-26	29	97	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqrit....aeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++RW Pt++Qi+iL+ely+ +G+++P+ e++qr t +L+ y +ie+kNVfyWFQN++aRe+ k+ Rmu_sc0002792.1_g000029.1 29 SNSRWLPTTDQIRILKELYDdKGVKSPTVEQVQRSTlqstLQLKWYRQIENKNVFYWFQNQRAREKLKK 97 689**************999*******8652221689*********************885 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MEPQNRHPTE DGGSNKAAES SPNMHCKQSN SRWLPTTDQI RILKELYDDK GVKSPTVEQV 60 QRSTLQSTLQ LKWYRQIENK NVFYWFQNQR AREKLKKKNL TSDVQVPKQR SGLVGGSINL 120 NFGSTSSADV GGSIMEQRGE DHQEVKTLPL FPMHSEDIFG NMKTTSDEGG GHGGGSYISL 180 ELSLSCEGKA GKSFRSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	3e-23	WOX family protein