PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002810.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 241aa MW: 26533 Da PI: 4.7769

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002810.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	54.9	1.9e-17	168	222	3	57
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++kr rr+ +NRe+ArrsR+RK++ ++eLe v+ L eN++L +l ++++ Rmu_sc0002810.1_g000001.1 168 DIKRIRRMVSNRESARRSRRRKQQHLQELEGQVDILRVENSTLFMQLTDASQQYR 222 58*****************************************977766666655 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MERNSAAVHS QMTPSMFGSS WDGDHMKRSA PQLEIDEWIN HGVTADNQDE FRADRSFAET 60 DGFFGDVCSG GDLSFAFKNR VIMNGFSSSG LTETLLSPQN LTPKNSSLSA TMDSQSSICV 120 GTPTSAANPI GRDNQARGAT SGSSGDQSDE DDFEIEAGPC GDSTNPLDIK RIRRMVSNRE 180 SARRSRRRKQ QHLQELEGQV DILRVENSTL FMQLTDASQQ YRDADTNNRV LKSDVEALRA 240 K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	183	190	RRSRRRKQ
2	185	190	SRRRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	3e-25	bZIP family protein