PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002867.1_g000019.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 214aa    MW: 23363.6 Da    PI: 10.1221
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002867.1_g000019.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.84.6e-144590454
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                        HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                               +h+e+ErrRR+riN+ +++Lr+llP+       + +Ka+ L ++v+++k+L
  Rmu_sc0002867.1_g000019.1 45 SHKEAERRRRQRINTHLSTLRSLLPST-----SRTDKASLLAEVVQHVKDL 90
                               8*************************7.....69***************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MLSFNELLLE RKYPRGYNFP SSWSPSVVNM KDGADSITSS AASLSHKEAE RRRRQRINTH  60
LSTLRSLLPS TSRTDKASLL AEVVQHVKDL KGRADELATQ EGDSSPFPGE LDEASVSYYG  120
EGLLKATLCC EDRPGLNRDL VQAIRSVRVR PVKAEMVTVG GRTKSVVVMK PTGGGGGEEE  180
VKDLKVALKA VVENRAFGSR VGLLGKRARF YGSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.16e-26bHLH family protein