PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002888.1_g000021.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 209aa    MW: 23483.1 Da    PI: 6.6258
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002888.1_g000021.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.81.2e-083262347
                               -HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqky 47
                               +W++Ia +++ gRt++++k++w++ 
  Rmu_sc0002888.1_g000021.1  3 RWSLIAGRIP-GRTDNEIKNYWNTT 26
                               5*********.************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MCRWSLIAGR IPGRTDNEIK NYWNTTLGKK VNNGQDDVHQ VHLTVENKNK KKKKKKYKTK  60
SLTTVLDSIA AIRTRAVRCV TSHLVPHPLV KNVHGTALEE SINNSEEDNT ITTATTTTTS  120
PSENLVLEFD VGKLFNVSES IPDSSDDYWE LCQFGGGDKV LEDQYGGYIN NGGGSSNNYK  180
WSSASSEPIL FSEEILKDWM REDCFHHQS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15056KKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52600.16e-12MYB family protein