PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0002888.1_g000051.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 212aa    MW: 24395.1 Da    PI: 5.0585
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0002888.1_g000051.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.94.1e-1758102147
                                TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                +g+ T++E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ 
  Rmu_sc0002888.1_g000051.1  58 KGNITEDEEELIIRLHKLLGNR-WSLIAGRIP-GRTDNEIKNYWNST 102
                                6899******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MVMRSSTYYD KNDGLKKGAW AASEDQIVKA YVKKHGLKRC GKGVRLRWLN YLRPDIIKGN  60
ITEDEEELII RLHKLLGNRW SLIAGRIPGR TDNEIKNYWN STLKRKLQQE NHLEVSKDEE  120
IKEDLSSSVV VAAATDEDAP RLTKNNVIED EDHHRQHHDA DVGGGVAAEA TNNKGTGDDE  180
YLRDDLWWNN FIMDFNDSQF DVSEFQNDIP EI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.11e-43MYB family protein