PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0002985.1_g000010.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 249aa MW: 27868.1 Da PI: 9.6368

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0002985.1_g000010.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	41.5	2.2e-13	30	91	2	57
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+ +t++ +++L+elF++ r p+ e+++++ +l +++ ++V++WF N++a+ek+ Rmu_sc0002985.1_g000010.1 30 STRWIPTTDHIRILKELFYNkgVRSPTIEQIQRIYLQLkwygKIEFKKVYYWFLNQKAREKQ 91 58***************7789***********************************97 PP
2	Wus_type_Homeobox	82.3	6e-27	29	93	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRW Pt++ i+iL+el++ +G+r+P+ e+iqri +L+ yGkie k V+yWF N+kaRe+qk+ Rmu_sc0002985.1_g000010.1 29 SSTRWIPTTDHIRILKELFYnKGVRSPTIEQIQRIYLQLKWYGKIEFKKVYYWFLNQKAREKQKK 93 689************98769***************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MEPQNRHPTE DGGSNKAAGS SANMLRRKSS TRWIPTTDHI RILKELFYNK GVRSPTIEQI 60 QRIYLQLKWY GKIEFKKVYY WFLNQKAREK QKKRSTSDVH VPMQRSKLVG DDNVTNWKHE 120 DQYINFGSSA PAFASSAGVM IAFNGQMGNY GGYGSMNMEK SARDCSISAG RGTSSTFFDM 180 NVDQTFMEQR GEDHQEIETL SLFPVHGEDI FGNIKTTSDG GGGHGGGSHT SLELSLSCEG 240 KAGKSFRSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	5e-26	WOX family protein