PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003044.1_g000040.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 186aa MW: 21225.1 Da PI: 9.3932

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003044.1_g000040.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	79.4	6.4e-25	39	126	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleH 85 Yn+Y+ + GFs+r++++ k+kr++e t+r fvC keg r+++k++ r++raetrtgC akl +k+++ ++k+ vt++++ H Rmu_sc0003044.1_g000040.1 39 YNRYGGKKGFSIRRETHGKNKRTKELTSRLFVCCKEGIRSKDKRD-YMIRKPRAETRTGCGAKLCIKLNRrNNKFFVTHFVEGH 121 ****************************************999.99*****************99********* PP FAR1 86 nHela 90 nH+l+ Rmu_sc0003044.1_g000040.1 122 NHPLV 126 *96 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MDNSLGATDI DIENSDLELD WKPRKGMEFD SEQAAYDSYN RYGGKKGFSI RRETHGKNKR 60 TKELTSRLFV CCKEGIRSKD KRDYMIRKPR AETRTGCGAK LCIKLNRRNN KFFVTHFVEG 120 HNHPLVGKEC SHMLPSQRKV QDSQGIDIDL AHDFGIGVTS LYELMGKQAG GRDDVGYTKQ 180 EIVMSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-25	FAR1 family protein