PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003076.1_g000019.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 139aa    MW: 15815.1 Da    PI: 8.0782
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003076.1_g000019.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.81.6e-123593799
                               EEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                         B3 37 tledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                               +lede+g+++e k+ ++k +    l++GW++F  a++L +gD++vF+l+ +s+f  +v v+r+
  Rmu_sc0003076.1_g000019.1  3 VLEDENGKKFETKYLVEKIG----LSGGWRGFSIAHKLLAGDVLVFHLVTESKF--KVYVIRS 59
                               79************555555....************************998999..8888775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MFVLEDENGK KFETKYLVEK IGLSGGWRGF SIAHKLLAGD VLVFHLVTES KFKVYVIRSN  60
GLGEVECALG LVQLDAEICR LHDAERMAAQ FEQQLDRAKG GKRKVTSRQE TARSPIGTYL  120
TFPERESRQK QDSWLCHEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-18B3 family protein