PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003076.1_g000020.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Protein Properties

Length: 516aa MW: 58261 Da PI: 8.569

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003076.1_g000020.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	61	2e-19	161	250	2	99
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 +kv++ps+v++ +l +p++f++eh+ k +++++lede+g++++ k+ + k + l++GW+ F a++L egD++vF+ Rmu_sc0003076.1_g000020.1 161 VKVMMPSHVTRVFWLGIPRSFCREHMPK--DDTMIVLEDENGEEYQTKYLVAKEG----LSGGWRAFSAAHKLLEGDVLVFH-- 236 69*********************744..6789***********655555....9********************.. PP SSSEE..EEEEE-S CS B3 86 grsefelvvkvfrk 99 + + +l+v ++r+ Rmu_sc0003076.1_g000020.1 237 KVMPSKLKVYIVRS 250 55889999999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MAVVEEHKES SSCPQPKLEK VRQPKNEDKD KPFCQNSSRL KQMTKNNQLA LVNVISRGEF 60 MAVVEEHKES SSCPQPKLEK VRQPKNEDKD KPFCQNSSRL KQMTKNNVVS AKPMKSDSHK 120 PKTCKKAKVK SLYDTSKAQC SVLERANELA ANLAPEFPSL VKVMMPSHVT RVFWLGIPRS 180 FCREHMPKDD TMIVLEDENG EEYQTKYLVA KEGLSGGWRA FSAAHKLLEG DVLVFHKVMP 240 SKLKVYIVRS TGSDEVDCSL GLIKFDHGIR RIKTKVTACE SSKNGKLEPI SVETLHENVQ 300 KENTTACNTM SGPISNQYQI DSEVLYSEVL DGIRLSESVI PFKEVSCIEN FKVTVSGSII 360 NAEISEHHLI KYYELCRSQN SFLHEHILER LNSSLVAGII SETVNLSDAI RACKITTSEC 420 DFWTWDRTLQ ASEMLGMNVG FLRARLDQLA SLASKSKLCK EARLARDQAV KDMITLEAKL 480 VRAREVINRL NFEIESLNTS SKKLEAMFKE VAKAPW

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MAVVEEHKES SSCPQPKLEK VRQPKNEDKD KPFCQNSSRL KQMTKNNQLA LVNVISRGEF  60
MAVVEEHKES SSCPQPKLEK VRQPKNEDKD KPFCQNSSRL KQMTKNNVVS AKPMKSDSHK  120
PKTCKKAKVK SLYDTSKAQC SVLERANELA ANLAPEFPSL VKVMMPSHVT RVFWLGIPRS  180
FCREHMPKDD TMIVLEDENG EEYQTKYLVA KEGLSGGWRA FSAAHKLLEG DVLVFHKVMP  240
SKLKVYIVRS TGSDEVDCSL GLIKFDHGIR RIKTKVTACE SSKNGKLEPI SVETLHENVQ  300
KENTTACNTM SGPISNQYQI DSEVLYSEVL DGIRLSESVI PFKEVSCIEN FKVTVSGSII  360
NAEISEHHLI KYYELCRSQN SFLHEHILER LNSSLVAGII SETVNLSDAI RACKITTSEC  420
DFWTWDRTLQ ASEMLGMNVG FLRARLDQLA SLASKSKLCK EARLARDQAV KDMITLEAKL  480
VRAREVINRL NFEIESLNTS SKKLEAMFKE VAKAPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	2e-31	B3 family protein