PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003076.1_g000024.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Protein Properties

Length: 534aa MW: 58999.4 Da PI: 5.7149

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003076.1_g000024.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	32.4	1.6e-10	2	58	36	98
EEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 36 ltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + ledesg++++ k+ + + l++GW++F a++L egD+vvF+++ s+f +v ++r Rmu_sc0003076.1_g000024.1 2 IALEDESGEEYQTKY--LADK--VGLSGGWRGFSIAHKLVEGDVVVFHRVTPSKF--KVYIVR 58 789**********..4444..45*********************7665666..888877 PP

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence
MIALEDESGE EYQTKYLADK VGLSGGWRGF SIAHKLVEGD VVVFHRVTPS KFKVYIVRSK 60 GSDESDCSLG LINLGVCIKE MDTGDITTCE GAEYEDIRPI SVENPQNYNT IACNTKSSPI 120 ADLSENDTGS LGSEVFDGIR LAESVIPFKE VSSLENFNII VDGFIINSEF PKPVLAKYYD 180 LCCSQNAYLH EHLLDGLNWQ LITGAISEIT TIAEGIRTCK ASTLECNFPT WNKTLQAFEV 240 FGMNVGFLRA RLDKLASLAS ESKRGKEARH EREQAEIEMR TLEAKLLEVK RTVSRLLEVE 300 TETQNCRSVS SGYWPRRRAS SAAGRDVGAS DHSSDRILGP RGILLSCLQS TAVFAHVGAL 360 HKLVATGCVA TVRIRSAIFY DVGSIWIESE MHSRLVVDSN QIRQRVTVGV PVLGLILGSR 420 GLELWWREMV SAEIPSSTIV RWWSRSKCGG STVWGGDRGG WATCATIVLG WVGLDVWTFL 480 ALVQLGACSG LDGSWARGLT LGRRWDVFSI IIFSYLYVYF LVVVLISGYP FLVE

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence

MIALEDESGE EYQTKYLADK VGLSGGWRGF SIAHKLVEGD VVVFHRVTPS KFKVYIVRSK  60
GSDESDCSLG LINLGVCIKE MDTGDITTCE GAEYEDIRPI SVENPQNYNT IACNTKSSPI  120
ADLSENDTGS LGSEVFDGIR LAESVIPFKE VSSLENFNII VDGFIINSEF PKPVLAKYYD  180
LCCSQNAYLH EHLLDGLNWQ LITGAISEIT TIAEGIRTCK ASTLECNFPT WNKTLQAFEV  240
FGMNVGFLRA RLDKLASLAS ESKRGKEARH EREQAEIEMR TLEAKLLEVK RTVSRLLEVE  300
TETQNCRSVS SGYWPRRRAS SAAGRDVGAS DHSSDRILGP RGILLSCLQS TAVFAHVGAL  360
HKLVATGCVA TVRIRSAIFY DVGSIWIESE MHSRLVVDSN QIRQRVTVGV PVLGLILGSR  420
GLELWWREMV SAEIPSSTIV RWWSRSKCGG STVWGGDRGG WATCATIVLG WVGLDVWTFL  480
ALVQLGACSG LDGSWARGLT LGRRWDVFSI IIFSYLYVYF LVVVLISGYP FLVE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	3e-18	B3 family protein