PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003094.1_g000012.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 195aa    MW: 22064.6 Da    PI: 4.6503
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003094.1_g000012.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.22.2e-1468127155
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpse..ng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                s y+GV++   +g+Wv+e r+ps+   g   k+ +r +lg+f+ta e a a+++ +k+++g
  Rmu_sc0003094.1_g000012.1  68 SSYRGVSQGI-WGKWVSESRVPSTntHGltlKKvARLWLGTFDTAVEVALAYDKTAKAMYG 127
                                67*****887.**********8884655998779************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MMPESSDVDR QMGKRPRVDD TLVKWEKYNE NSDFAKDGFV NRMPRKMPTT GARKGCMRGK  60
GGPENLNSSY RGVSQGIWGK WVSESRVPST NTHGLTLKKV ARLWLGTFDT AVEVALAYDK  120
TAKAMYGPVF PKSLETSISD ETTESVKDEL QMEDELVNND VEVEELAINN VRESVDEWHS  180
EPKYVKCESE TEDEC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.11e-28ERF family protein