PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003116.1_g000010.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 192aa    MW: 20906 Da    PI: 7.4105
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003116.1_g000010.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.3e-173584255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                                ++GVr++  +g+WvAeIr+p+    r +r +lg+f t  eAa a++ a++kl+g
  Rmu_sc0003116.1_g000010.1 35 TFRGVRQRT-WGKWVAEIREPK----RgARLWLGTFNTSTEAALAYDDAARKLYG 84
                               69****999.**********83....46************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MDNDQERKVT RKANMGRSRK GSMKGKGGPE NATCTFRGVR QRTWGKWVAE IREPKRGARL  60
WLGTFNTSTE AALAYDDAAR KLYGSSAKLN LPDHSSSSSS SSSTSPSSKT SSADKGCGEH  120
KHEAYSGDMH GGWSSNNREN DCLWESNPVL SADWSGVCGE REFLELNDIG IMMGGNGFVS  180
CEASLEEAPW SL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18450.11e-34ERF family protein