PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003124.1_g000019.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 143aa    MW: 16189.3 Da    PI: 10.4515
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003124.1_g000019.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox46.56.2e-153091257
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               ++R+t+t++q+++L+el+ +   r p+ae+++++  +l    +++ + +++WF N+ a+e++
  Rmu_sc0003124.1_g000019.1 30 STRWTPTTYQIRILKELYCNkgVRSPTAEQIQRICLQLkrygKIEGKYIFYWFGNHMARERQ 91
                               58****************97679*************************************96 PP
2Wus_type_Homeobox95.93.4e-312993265
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               ++tRWtPt+ Qi+iL+ely  +G+r+P++e+iqri  +L++yGkie+k +fyWF N+ aRerqk+
  Rmu_sc0003124.1_g000019.1 29 SSTRWTPTTYQIRILKELYCnKGVRSPTAEQIQRICLQLKRYGKIEGKYIFYWFGNHMARERQKK 93
                               689****************669*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    
MEPKTQQPTE DGGSNKIAGS SANMLYRRSS TRWTPTTYQI RILKELYCNK GVRSPTAEQI  60
QRICLQLKRY GKIEGKYIFY WFGNHMARER QKKRFTSDVH VPMQRSGLIG NGNGTNWKPE  120
DQYINFGSSA SASASSAGVI AFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.12e-31WOX family protein